Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908380.1_cds_XP_016458492.1_52116
CDS Infomation

[gene=LOC107782162] [db_xref=GeneID:107782162] [protein=glycerophosphodiester phosphodiesterase GDPDL7-like] [protein_id=XP_016458492.1] [location=join(10129..10243,10329..10625,11270..11379,11483..11990,12080..12121,12682..12957,13248..13384,13488..13974,14112..14464)] [gbkey=CDS]
Sequence

ATGATTCGACATATCTTATTAGTTTCCTTGCTAATCCATTGCACTTTAGCTCAACCAAAA
GGTGGAAAGCCTCTTTCTCCTCCTCTTCCTAAGAGAACATGGTTAACTTTACATGGTGAT
GAGCCAATTGTCGTTGCGAATGGGGGATATTCAGGACTTCTTCCCGCGCAAACAGATATT
GCATATTCTCAAGCAAAAGTATTAGGAAAGCGCGGTACTGTCTTGCTATGTGATCTACAT
ATGAGTCGCGACGGACAGGGCTTTTGTTTGTCACAGTTAAACCTTCAGAATACAACAAAT
GCAGCTGATGCTTTTCCGAATCGTAGAAAAACATACATTGTTAATGGCAAAGAAATTCAA
GGATGGTTTGCACTGGTTTTTACAGCTGATGAGCTTTATAGTAAATTGCAAGTGACACAA
TCAATATTCAGCAGAACAGATTTATTTGATTTTTCACCACCAACTCCAACAGACTTATTT
TTAGAAGATAACATGAAGTCTCTAGTGTGGTTCAATGCCGAGTACGCAACATTCTACAGC
CAACACAAGTTGAGTTTATTGGATCATATTAAACAACTTTTGGAGATAAAGAAGGATATC
TCCTACATATCGTCTCCAGAGATCGGTTTCTTGAAAAGCGTGGGACCAGTTGTGCGCGGT
TTAAGAACAAAGTTGATGTTCAAGTTTCCTGCTGATAAAAATGCAGTCGAACCAACAACA
AATGAAACATATGCTTCACTATTAACAAAGCTCTCTATGATCAAGACTTTTGCTGCGGGG
ATCGTTGTGCCTAGAGAGTACATATGGCCTGTCAATAAAGCTCGCTATTTAGACTCCAGT
ACTAATCTAGTCACCGATGCTCATAAACTAGGCCTTGAAGTTTTCTCATATGGATTTGCA
AATGACAACTATTTGCCTTACAATTATACCTATGATCCACAAAGAGAGTATTTGCAATTC
GTGGACAACTCGTTGTTTGCTGTTGACGGTGTGATCACGGACTTCACTATGTCTGCATCT
ATGGCAATTGCTTGCTTGGCAGGAAGTCGGAACGCTTCCAGGAAAGTCCCTACTCTGATC
ATTTCTTCAAATGGAGCAAATGGAGATTATCCGGGAGCAACAGATCTTGCCTATCAGAAA
GCAGTAGAAGATGGTGTTGACATAATCGATTGTTCTGTTCAAATGACAAAAGATGGAGTT
GCACTTTGTTTGCCTTCAATTGATCTCATGCCATCCACTACAGCAGCCGGACCTTTCATG
AGTCGAGCAGCTAAGATCGATCCCATTCAATCGGCCATGGGAATTTTCTCTTTCGACCTT
ACGTGGGAGGAAATTCAATCATTAAAACCTCAAATGTCCGGTGGATTTAATGGAGAATTG
GCAAGGGATCCAGCGCGCAAAAATGTGGGCAAGTTTGTAACACTCTCTGATTTCTTGGAA
TTCGCCAAGGCAAAAGCAGTTCCTGGCGTTCTGATCAACATTGAAAATGCTGCCTACCTT
GCAACAAACAAAGGTCTTGACATTGTTGGCGCCGTCACAACTGCTTTGAGCAATGCCACA
CTTGATAAGAACTTGACTCAGAAAGTTCTGATCATGTCAAGTGAAAGTTCAGTGCTAGAT
AAATTCAAAACTATCCCGACTTACCAAAAAGTTCTTCACATTAAGGAACAAGTGGGATTT
GTAACGAACGAGACTGCATTGGAAGTCAAGAAGTACGCGGACGCAGTACTTTTACACAAG
CATTCAATATATTCAGAATTTCGACAGGAGGGTTTGACTTTCAACCTCACTAACCTTATT
GACCGTATGCATTGGGCTAATGTTAGCGTCTACGCTGGAAATGTTATAAATGAATTCCAA
GACATTTTCATGGATTTTGGCTCTGATCCTTATCTTCTGATCCATAACCTTATTTACTAT
GGCGCGGATGGAATTGTCACTCAGTATCCAAGCACTGCAAGTGCTTACAGCCGAAACTTG
TGCACTGGTAATCCGGACGCGTATAAGATACAAGACTTAAATCCAGGGGATGTTATAGCA
GTTATGCTTGATCCAAAAGAAGTAGCAGAGTACAAGCCGCCTCCGCCCGTGCATTTTGAG
ACTAAGAACTTTGTCACTCCACCATTGCCTCCTGTAGCTGATATTGCCAAGGATGACGGC
GGTTCTACCTCCAACTCCACGTCCAATGCCAACACGTCCGACGCTCCTTCACCTTCATCT
CCACCTCCTCCTGCACAAGCCGCGAGTAGCGCAACAGCTCCCACAATTAATGGTGCTGCT
CTCTTCTTTGCAACCATGCTCGGACTAGTATATTATAAAATTTAG

Peptide Sequence

PEP ID

XP_016458492.1
PEP Infomation

PREDICTED: glycerophosphodiester phosphodiesterase GDPDL7-like [Nicotiana tabacum]
Sequence

MIRHILLVSLLIHCTLAQPKGGKPLSPPLPKRTWLTLHGDEPIVVANGGYSGLLPAQTDI
AYSQAKVLGKRGTVLLCDLHMSRDGQGFCLSQLNLQNTTNAADAFPNRRKTYIVNGKEIQ
GWFALVFTADELYSKLQVTQSIFSRTDLFDFSPPTPTDLFLEDNMKSLVWFNAEYATFYS
QHKLSLLDHIKQLLEIKKDISYISSPEIGFLKSVGPVVRGLRTKLMFKFPADKNAVEPTT
NETYASLLTKLSMIKTFAAGIVVPREYIWPVNKARYLDSSTNLVTDAHKLGLEVFSYGFA
NDNYLPYNYTYDPQREYLQFVDNSLFAVDGVITDFTMSASMAIACLAGSRNASRKVPTLI
ISSNGANGDYPGATDLAYQKAVEDGVDIIDCSVQMTKDGVALCLPSIDLMPSTTAAGPFM
SRAAKIDPIQSAMGIFSFDLTWEEIQSLKPQMSGGFNGELARDPARKNVGKFVTLSDFLE
FAKAKAVPGVLINIENAAYLATNKGLDIVGAVTTALSNATLDKNLTQKVLIMSSESSVLD
KFKTIPTYQKVLHIKEQVGFVTNETALEVKKYADAVLLHKHSIYSEFRQEGLTFNLTNLI
DRMHWANVSVYAGNVINEFQDIFMDFGSDPYLLIHNLIYYGADGIVTQYPSTASAYSRNL
CTGNPDAYKIQDLNPGDVIAVMLDPKEVAEYKPPPPVHFETKNFVTPPLPPVADIAKDDG
GSTSNSTSNANTSDAPSPSSPPPPAQAASSATAPTINGAALFFATMLGLVYYKI

Transcript Sequence

Gene sequence data has not been registered.